Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 RFPL4AP1-201ENST00000530883 850 ntBASIC26.14■■□□□ 1.78
VPS8Q8N3P4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
VPS8Q8N3P4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC26.14■■□□□ 1.77
VPS8Q8N3P4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
VPS8Q8N3P4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
VPS8Q8N3P4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
VPS8Q8N3P4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC26.14■■□□□ 1.77
VPS8Q8N3P4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC26.14■■□□□ 1.77
VPS8Q8N3P4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC26.14■■□□□ 1.77
VPS8Q8N3P4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC26.14■■□□□ 1.77
VPS8Q8N3P4 SLC25A39P2-201ENST00000537614 270 ntBASIC26.14■■□□□ 1.77
VPS8Q8N3P4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC26.14■■□□□ 1.77
VPS8Q8N3P4 AC015911.4-201ENST00000588022 1070 ntBASIC26.14■■□□□ 1.77
VPS8Q8N3P4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 AP001059.3-201ENST00000619053 235 ntBASIC26.13■■□□□ 1.77
VPS8Q8N3P4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
VPS8Q8N3P4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 AC012313.1-201ENST00000593393 3059 ntBASIC26.12■■□□□ 1.77
VPS8Q8N3P4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
VPS8Q8N3P4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS8Q8N3P4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms