Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 INE1-201ENST00000456273 945 ntBASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 AC023310.3-201ENST00000557027 670 ntBASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 AC100756.1-201ENST00000562736 682 ntBASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 AC138749.3-201ENST00000567691 622 ntBASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 AC116165.1-201ENST00000611806 668 ntBASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 AL353779.1-201ENST00000434793 351 ntBASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL27A1Q8IZC6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL27A1Q8IZC6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL27A1Q8IZC6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 RN7SL618P-201ENST00000477850 296 ntBASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 AC055876.2-201ENST00000531834 546 ntBASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 PCDHB17P-201ENST00000539533 2393 ntBASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL27A1Q8IZC6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AC112492.5-201ENST00000421897 457 ntBASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AC098859.1-201ENST00000502915 1238 ntBASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 SRD5A3P1-201ENST00000603021 949 ntBASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AC017083.2-201ENST00000608069 979 ntBASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AL391069.4-201ENST00000609583 481 ntBASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AC092068.3-201ENST00000587894 2016 ntBASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AL023806.1-201ENST00000603994 1649 ntBASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AC093004.1-201ENST00000508850 424 ntBASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms