Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHPFQ8IZ52 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 AL135744.1-201ENST00000565098 629 ntBASIC17.17■□□□□ 0.34
CHPFQ8IZ52 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 AC009093.7-201ENST00000623853 1223 ntBASIC17.17■□□□□ 0.34
CHPFQ8IZ52 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHPFQ8IZ52 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 PP12613-201ENST00000424958 2230 ntBASIC17.16■□□□□ 0.34
CHPFQ8IZ52 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 EGFEM1P-202ENST00000431685 1563 ntBASIC17.16■□□□□ 0.34
CHPFQ8IZ52 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 AC080080.1-201ENST00000625121 2420 ntBASIC17.16■□□□□ 0.34
CHPFQ8IZ52 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 FAM8A3P-201ENST00000427218 844 ntBASIC17.16■□□□□ 0.34
CHPFQ8IZ52 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 DUX4L17-201ENST00000557360 1267 ntBASIC17.16■□□□□ 0.34
CHPFQ8IZ52 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 AL353732.1-201ENST00000569618 1459 ntBASIC17.16■□□□□ 0.34
CHPFQ8IZ52 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.16■□□□□ 0.34
CHPFQ8IZ52 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 AC108860.2-201ENST00000562760 2183 ntBASIC17.15■□□□□ 0.34
CHPFQ8IZ52 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 PCDHA12-202ENST00000613593 2588 ntBASIC17.15■□□□□ 0.34
CHPFQ8IZ52 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms