Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 RPS2P1-201ENST00000434010 821 ntBASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 SAPCD2P3-201ENST00000455031 850 ntBASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 AC006538.1-201ENST00000567905 1585 ntBASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE8Q86YQ8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 AC046158.3-201ENST00000624947 2558 ntBASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 HNRNPDP1-201ENST00000439535 754 ntBASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE8Q86YQ8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 PMS2P1-201ENST00000431037 1228 ntBASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 EMBP1-201ENST00000458200 901 ntBASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 KRT18P56-201ENST00000507275 550 ntBASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 SLC22A20-204ENST00000530038 1673 ntBASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 PI4KAP1-204ENST00000612579 1703 ntBASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 AL512652.2-201ENST00000625156 1716 ntBASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE8Q86YQ8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE8Q86YQ8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms