Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 AC055876.3-201ENST00000431496 288 ntBASIC17.11■□□□□ 0.33
C12orf40Q86WS4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 AC138649.4-201ENST00000612222 287 ntBASIC17.11■□□□□ 0.33
C12orf40Q86WS4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf40Q86WS4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 MIR346-201ENST00000362234 95 ntBASIC17.1■□□□□ 0.33
C12orf40Q86WS4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 TREML5P-201ENST00000421694 576 ntBASIC17.1■□□□□ 0.33
C12orf40Q86WS4 AC107890.1-201ENST00000422478 521 ntBASIC17.1■□□□□ 0.33
C12orf40Q86WS4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 ALG1L8P-201ENST00000533887 760 ntBASIC17.1■□□□□ 0.33
C12orf40Q86WS4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 MIR4745-201ENST00000577608 62 ntBASIC17.1■□□□□ 0.33
C12orf40Q86WS4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 MIR6080-201ENST00000617359 66 ntBASIC17.1■□□□□ 0.33
C12orf40Q86WS4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 FO538757.1-201ENST00000623083 1397 ntBASIC17.1■□□□□ 0.33
C12orf40Q86WS4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf40Q86WS4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.09■□□□□ 0.33
C12orf40Q86WS4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.09■□□□□ 0.33
C12orf40Q86WS4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
C12orf40Q86WS4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
C12orf40Q86WS4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
C12orf40Q86WS4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
C12orf40Q86WS4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
C12orf40Q86WS4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C12orf40Q86WS4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C12orf40Q86WS4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.08■□□□□ 0.32
C12orf40Q86WS4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C12orf40Q86WS4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C12orf40Q86WS4 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.08■□□□□ 0.32
C12orf40Q86WS4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C12orf40Q86WS4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C12orf40Q86WS4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.08■□□□□ 0.32
C12orf40Q86WS4 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.08■□□□□ 0.32
C12orf40Q86WS4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.08■□□□□ 0.32
C12orf40Q86WS4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms