Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC4Q6S5L8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC4Q6S5L8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC4Q6S5L8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHC4Q6S5L8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC4Q6S5L8 SLC22A20-204ENST00000530038 1673 ntBASIC19.04■□□□□ 0.64
SHC4Q6S5L8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC4Q6S5L8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC4Q6S5L8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC4Q6S5L8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SHC4Q6S5L8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 LAGE3P1-201ENST00000425356 484 ntBASIC19.03■□□□□ 0.64
SHC4Q6S5L8 AC107918.2-201ENST00000530817 355 ntBASIC19.03■□□□□ 0.64
SHC4Q6S5L8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 GGT3P-204ENST00000453783 1664 ntBASIC19.03■□□□□ 0.64
SHC4Q6S5L8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 AC008741.2-201ENST00000612792 3115 ntBASIC19.03■□□□□ 0.64
SHC4Q6S5L8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.03■□□□□ 0.64
SHC4Q6S5L8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.02■□□□□ 0.64
SHC4Q6S5L8 PMS2P1-201ENST00000431037 1228 ntBASIC19.02■□□□□ 0.64
SHC4Q6S5L8 RPS2P1-201ENST00000434010 821 ntBASIC19.02■□□□□ 0.64
SHC4Q6S5L8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SHC4Q6S5L8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.02■□□□□ 0.63
SHC4Q6S5L8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHC4Q6S5L8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHC4Q6S5L8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 GGT4P-201ENST00000623672 1708 ntBASIC19.01■□□□□ 0.63
SHC4Q6S5L8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 TP73-AS1-207ENST00000624167 988 ntBASIC19.01■□□□□ 0.63
SHC4Q6S5L8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC4Q6S5L8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms