Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H2BCQ6DN03 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 KRT8P13-201ENST00000463294 1010 ntBASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H2BCQ6DN03 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 MEP1AP4-201ENST00000423244 1087 ntBASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 MIR3909-201ENST00000579518 119 ntBASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 AP000997.3-201ENST00000623333 2250 ntBASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST2H2BCQ6DN03 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST2H2BCQ6DN03 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST2H2BCQ6DN03 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms