Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KHDC1Q4VXA5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 SLC25A1P3-201ENST00000395415 828 ntBASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 OR7E14P-202ENST00000530490 1290 ntBASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 AC243591.1-201ENST00000452967 1364 ntBASIC17.15■□□□□ 0.34
KHDC1Q4VXA5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
KHDC1Q4VXA5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.14■□□□□ 0.34
KHDC1Q4VXA5 AC005915.1-201ENST00000624912 2018 ntBASIC17.14■□□□□ 0.34
KHDC1Q4VXA5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
KHDC1Q4VXA5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 AL662844.1-201ENST00000546340 181 ntBASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KHDC1Q4VXA5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms