Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 AC009533.2-201ENST00000543664 586 ntBASIC18.59■□□□□ 0.57
TSR1Q2NL82 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 AL592071.1-201ENST00000611956 408 ntBASIC18.59■□□□□ 0.57
TSR1Q2NL82 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSR1Q2NL82 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.59■□□□□ 0.57
TSR1Q2NL82 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.58■□□□□ 0.57
TSR1Q2NL82 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TSR1Q2NL82 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TSR1Q2NL82 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TSR1Q2NL82 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.58■□□□□ 0.57
TSR1Q2NL82 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TSR1Q2NL82 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TSR1Q2NL82 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TSR1Q2NL82 AL662844.4-201ENST00000606367 2838 ntBASIC18.58■□□□□ 0.57
TSR1Q2NL82 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.58■□□□□ 0.56
TSR1Q2NL82 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TSR1Q2NL82 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSR1Q2NL82 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.58■□□□□ 0.56
TSR1Q2NL82 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.58■□□□□ 0.56
TSR1Q2NL82 AL353801.3-201ENST00000609898 542 ntBASIC18.58■□□□□ 0.56
TSR1Q2NL82 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.58■□□□□ 0.56
TSR1Q2NL82 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSR1Q2NL82 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TSR1Q2NL82 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TSR1Q2NL82 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TSR1Q2NL82 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.58■□□□□ 0.56
TSR1Q2NL82 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSR1Q2NL82 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSR1Q2NL82 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSR1Q2NL82 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TSR1Q2NL82 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSR1Q2NL82 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 PCDHB17P-201ENST00000539533 2393 ntBASIC18.57■□□□□ 0.56
TSR1Q2NL82 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 KLF4P1-201ENST00000412782 1185 ntBASIC18.57■□□□□ 0.56
TSR1Q2NL82 AL645929.1-201ENST00000420084 975 ntBASIC18.57■□□□□ 0.56
TSR1Q2NL82 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 AL513523.2-202ENST00000427283 2040 ntBASIC18.57■□□□□ 0.56
TSR1Q2NL82 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSR1Q2NL82 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.57■□□□□ 0.56
TSR1Q2NL82 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms