Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2B3Q16720 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2B3Q16720 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2B3Q16720 MIR4492-201ENST00000581627 80 ntBASIC20.65■□□□□ 0.9
ATP2B3Q16720 AC027612.4-201ENST00000605371 583 ntBASIC20.65■□□□□ 0.9
ATP2B3Q16720 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2B3Q16720 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2B3Q16720 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2B3Q16720 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2B3Q16720 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2B3Q16720 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2B3Q16720 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ATP2B3Q16720 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ATP2B3Q16720 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.64■□□□□ 0.9
ATP2B3Q16720 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.64■□□□□ 0.9
ATP2B3Q16720 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP2B3Q16720 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP2B3Q16720 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
ATP2B3Q16720 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP2B3Q16720 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
ATP2B3Q16720 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP2B3Q16720 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 TUBB8P12-201ENST00000308911 1335 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 TUBB7P-202ENST00000428444 1305 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 TUBB8P7-204ENST00000567960 1332 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 RNU1-129P-201ENST00000384064 167 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 AC004461.1-201ENST00000412461 403 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 AL671277.1-201ENST00000429656 993 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 U1.21-201ENST00000580816 167 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 AC022145.2-201ENST00000598203 171 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 AL031055.1-201ENST00000606362 631 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2B3Q16720 AC080080.1-201ENST00000625121 2420 ntBASIC20.64■□□□□ 0.89
ATP2B3Q16720 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2B3Q16720 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 AL645608.8-201ENST00000606034 2086 ntBASIC20.63■□□□□ 0.89
ATP2B3Q16720 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 KRT18P28-201ENST00000453838 1332 ntBASIC20.63■□□□□ 0.89
ATP2B3Q16720 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 AC109635.5-201ENST00000533593 962 ntBASIC20.63■□□□□ 0.89
ATP2B3Q16720 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 CYP2A7P1-201ENST00000595391 815 ntBASIC20.63■□□□□ 0.89
ATP2B3Q16720 AP001350.2-201ENST00000625104 1094 ntBASIC20.63■□□□□ 0.89
ATP2B3Q16720 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2B3Q16720 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATP2B3Q16720 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms