Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SSRP1Q08945 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.59■□□□□ 0.73
SSRP1Q08945 RNA5SP415-201ENST00000517246 115 ntBASIC19.59■□□□□ 0.73
SSRP1Q08945 IGHV3-22-201ENST00000520721 359 ntBASIC19.59■□□□□ 0.73
SSRP1Q08945 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.59■□□□□ 0.73
SSRP1Q08945 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.59■□□□□ 0.73
SSRP1Q08945 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.59■□□□□ 0.73
SSRP1Q08945 OR7E47P-204ENST00000575924 449 ntBASIC19.59■□□□□ 0.73
SSRP1Q08945 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.59■□□□□ 0.73
SSRP1Q08945 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.59■□□□□ 0.73
SSRP1Q08945 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SSRP1Q08945 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.59■□□□□ 0.73
SSRP1Q08945 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SSRP1Q08945 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSRP1Q08945 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSRP1Q08945 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.58■□□□□ 0.73
SSRP1Q08945 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.58■□□□□ 0.73
SSRP1Q08945 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.58■□□□□ 0.73
SSRP1Q08945 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.58■□□□□ 0.73
SSRP1Q08945 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SSRP1Q08945 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSRP1Q08945 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSRP1Q08945 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSRP1Q08945 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.58■□□□□ 0.73
SSRP1Q08945 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSRP1Q08945 FDX1P1-201ENST00000449115 551 ntBASIC19.58■□□□□ 0.72
SSRP1Q08945 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
SSRP1Q08945 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.58■□□□□ 0.72
SSRP1Q08945 AC079776.4-201ENST00000511039 504 ntBASIC19.58■□□□□ 0.72
SSRP1Q08945 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.58■□□□□ 0.72
SSRP1Q08945 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
SSRP1Q08945 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSRP1Q08945 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.58■□□□□ 0.72
SSRP1Q08945 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SSRP1Q08945 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSRP1Q08945 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.58■□□□□ 0.72
SSRP1Q08945 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSRP1Q08945 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.58■□□□□ 0.72
SSRP1Q08945 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSRP1Q08945 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSRP1Q08945 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SSRP1Q08945 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SSRP1Q08945 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.58■□□□□ 0.72
SSRP1Q08945 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SSRP1Q08945 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
SSRP1Q08945 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSRP1Q08945 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSRP1Q08945 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
SSRP1Q08945 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.57■□□□□ 0.72
SSRP1Q08945 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 PCDHA14-201ENST00000506751 2298 ntBASIC19.57■□□□□ 0.72
SSRP1Q08945 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SSRP1Q08945 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 PMS2P1-201ENST00000431037 1228 ntBASIC19.57■□□□□ 0.72
SSRP1Q08945 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 AC009947.1-201ENST00000444350 727 ntBASIC19.57■□□□□ 0.72
SSRP1Q08945 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.57■□□□□ 0.72
SSRP1Q08945 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.57■□□□□ 0.72
SSRP1Q08945 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.57■□□□□ 0.72
SSRP1Q08945 MIR4751-201ENST00000578027 74 ntBASIC19.57■□□□□ 0.72
SSRP1Q08945 AC091167.2-201ENST00000579581 588 ntBASIC19.57■□□□□ 0.72
SSRP1Q08945 MIR4492-201ENST00000581627 80 ntBASIC19.57■□□□□ 0.72
SSRP1Q08945 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.57■□□□□ 0.72
SSRP1Q08945 AC010654.1-201ENST00000615722 808 ntBASIC19.57■□□□□ 0.72
SSRP1Q08945 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SSRP1Q08945 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SSRP1Q08945 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSRP1Q08945 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.57■□□□□ 0.72
SSRP1Q08945 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms