Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.08■□□□□ 0.64
CCNA1P78396 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.08■□□□□ 0.64
CCNA1P78396 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CCNA1P78396 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.08■□□□□ 0.64
CCNA1P78396 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNA1P78396 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNA1P78396 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNA1P78396 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNA1P78396 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNA1P78396 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.08■□□□□ 0.64
CCNA1P78396 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.08■□□□□ 0.64
CCNA1P78396 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCNA1P78396 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNA1P78396 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.07■□□□□ 0.64
CCNA1P78396 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNA1P78396 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.07■□□□□ 0.64
CCNA1P78396 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 AL596325.1-201ENST00000563991 1082 ntBASIC19.07■□□□□ 0.64
CCNA1P78396 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNA1P78396 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNA1P78396 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNA1P78396 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCNA1P78396 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNA1P78396 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.07■□□□□ 0.64
CCNA1P78396 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNA1P78396 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNA1P78396 AL138688.1-201ENST00000624851 1594 ntBASIC19.06■□□□□ 0.64
CCNA1P78396 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNA1P78396 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCNA1P78396 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.06■□□□□ 0.64
CCNA1P78396 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCNA1P78396 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.06■□□□□ 0.64
CCNA1P78396 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.06■□□□□ 0.64
CCNA1P78396 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.06■□□□□ 0.64
CCNA1P78396 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.06■□□□□ 0.64
CCNA1P78396 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCNA1P78396 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNA1P78396 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCNA1P78396 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CCNA1P78396 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CCNA1P78396 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNA1P78396 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.06■□□□□ 0.64
CCNA1P78396 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCNA1P78396 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.06■□□□□ 0.64
CCNA1P78396 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNA1P78396 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNA1P78396 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNA1P78396 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.05■□□□□ 0.64
CCNA1P78396 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.05■□□□□ 0.64
CCNA1P78396 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.05■□□□□ 0.64
CCNA1P78396 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCNA1P78396 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CCNA1P78396 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
CCNA1P78396 NME2P1-201ENST00000426182 414 ntBASIC19.05■□□□□ 0.64
CCNA1P78396 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.05■□□□□ 0.64
CCNA1P78396 RN7SL692P-201ENST00000464677 288 ntBASIC19.05■□□□□ 0.64
CCNA1P78396 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.05■□□□□ 0.64
CCNA1P78396 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNA1P78396 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.05■□□□□ 0.64
CCNA1P78396 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNA1P78396 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms