Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 AC092068.3-201ENST00000587894 2016 ntBASIC14.66□□□□□ -0.06
UBA52P62987 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.66□□□□□ -0.06
UBA52P62987 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.66□□□□□ -0.06
UBA52P62987 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UBA52P62987 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.66□□□□□ -0.06
UBA52P62987 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
UBA52P62987 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 PMS2P1-201ENST00000431037 1228 ntBASIC14.66□□□□□ -0.06
UBA52P62987 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.66□□□□□ -0.06
UBA52P62987 AC091607.1-201ENST00000490318 1060 ntBASIC14.66□□□□□ -0.06
UBA52P62987 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.66□□□□□ -0.06
UBA52P62987 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UBA52P62987 TP73-AS1-207ENST00000624167 988 ntBASIC14.66□□□□□ -0.06
UBA52P62987 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.66□□□□□ -0.06
UBA52P62987 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UBA52P62987 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.66□□□□□ -0.06
UBA52P62987 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
UBA52P62987 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UBA52P62987 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UBA52P62987 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.66□□□□□ -0.06
UBA52P62987 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 AC093010.1-201ENST00000473625 1624 ntBASIC14.66□□□□□ -0.06
UBA52P62987 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBA52P62987 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UBA52P62987 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.66□□□□□ -0.06
UBA52P62987 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UBA52P62987 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.65□□□□□ -0.06
UBA52P62987 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.65□□□□□ -0.06
UBA52P62987 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.65□□□□□ -0.06
UBA52P62987 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.65□□□□□ -0.06
UBA52P62987 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.65□□□□□ -0.06
UBA52P62987 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.65□□□□□ -0.06
UBA52P62987 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.65□□□□□ -0.06
UBA52P62987 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UBA52P62987 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
UBA52P62987 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 POM121L3P-201ENST00000419331 1163 ntBASIC14.65□□□□□ -0.06
UBA52P62987 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.65□□□□□ -0.06
UBA52P62987 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.65□□□□□ -0.06
UBA52P62987 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.65□□□□□ -0.06
UBA52P62987 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UBA52P62987 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.65□□□□□ -0.06
UBA52P62987 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.65□□□□□ -0.06
UBA52P62987 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.65□□□□□ -0.06
UBA52P62987 AL671883.3-201ENST00000603274 991 ntBASIC14.65□□□□□ -0.06
UBA52P62987 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.65□□□□□ -0.06
UBA52P62987 AL773604.1-201ENST00000617417 272 ntBASIC14.65□□□□□ -0.06
UBA52P62987 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UBA52P62987 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
UBA52P62987 HLA-J-201ENST00000462773 1622 ntBASIC14.65□□□□□ -0.06
UBA52P62987 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
UBA52P62987 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.65□□□□□ -0.06
UBA52P62987 LYSMD4-203ENST00000378904 2122 ntBASIC14.65□□□□□ -0.06
UBA52P62987 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBA52P62987 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
UBA52P62987 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
UBA52P62987 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
UBA52P62987 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
UBA52P62987 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
UBA52P62987 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBA52P62987 AC099063.4-201ENST00000641099 1602 ntBASIC14.64□□□□□ -0.07
UBA52P62987 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms