Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
AP1S1P61966 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.97■□□□□ 0.31
AP1S1P61966 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP1S1P61966 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
AP1S1P61966 DNAJB3-201ENST00000446806 729 ntBASIC16.97■□□□□ 0.31
AP1S1P61966 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.97■□□□□ 0.31
AP1S1P61966 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.97■□□□□ 0.31
AP1S1P61966 MIR3909-201ENST00000579518 119 ntBASIC16.97■□□□□ 0.31
AP1S1P61966 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 MTDHP5-201ENST00000598980 586 ntBASIC16.97■□□□□ 0.31
AP1S1P61966 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.97■□□□□ 0.31
AP1S1P61966 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 AL645728.1-201ENST00000366221 2101 ntBASIC16.97■□□□□ 0.31
AP1S1P61966 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
AP1S1P61966 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
AP1S1P61966 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S1P61966 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
AP1S1P61966 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 BX842568.4-201ENST00000421222 227 ntBASIC16.96■□□□□ 0.31
AP1S1P61966 AC140658.5-201ENST00000438532 169 ntBASIC16.96■□□□□ 0.31
AP1S1P61966 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.96■□□□□ 0.31
AP1S1P61966 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.96■□□□□ 0.31
AP1S1P61966 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
AP1S1P61966 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.96■□□□□ 0.31
AP1S1P61966 AC020916.1-201ENST00000587762 1774 ntBASIC16.96■□□□□ 0.31
AP1S1P61966 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S1P61966 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
AP1S1P61966 AC080080.1-201ENST00000625121 2420 ntBASIC16.96■□□□□ 0.3
AP1S1P61966 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.96■□□□□ 0.3
AP1S1P61966 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.96■□□□□ 0.3
AP1S1P61966 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
AP1S1P61966 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.95■□□□□ 0.3
AP1S1P61966 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.95■□□□□ 0.3
AP1S1P61966 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
AP1S1P61966 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 RNU1-129P-201ENST00000384064 167 ntBASIC16.95■□□□□ 0.3
AP1S1P61966 YBX2P1-201ENST00000394192 760 ntBASIC16.95■□□□□ 0.3
AP1S1P61966 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
AP1S1P61966 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
AP1S1P61966 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.95■□□□□ 0.3
AP1S1P61966 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.95■□□□□ 0.3
AP1S1P61966 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.95■□□□□ 0.3
AP1S1P61966 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.95■□□□□ 0.3
AP1S1P61966 U1.21-201ENST00000580816 167 ntBASIC16.95■□□□□ 0.3
AP1S1P61966 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.95■□□□□ 0.3
AP1S1P61966 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.95■□□□□ 0.3
AP1S1P61966 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP1S1P61966 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.95■□□□□ 0.3
AP1S1P61966 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
AP1S1P61966 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S1P61966 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
AP1S1P61966 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.94■□□□□ 0.3
AP1S1P61966 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP1S1P61966 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms