Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
CMC4P56277 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CMC4P56277 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.57□□□□□ -0.4
CMC4P56277 MIR574-201ENST00000385209 96 ntBASIC12.57□□□□□ -0.4
CMC4P56277 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.57□□□□□ -0.4
CMC4P56277 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.57□□□□□ -0.4
CMC4P56277 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.57□□□□□ -0.4
CMC4P56277 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 AC002347.1-201ENST00000569543 541 ntBASIC12.57□□□□□ -0.4
CMC4P56277 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.57□□□□□ -0.4
CMC4P56277 AC140113.2-201ENST00000604370 208 ntBASIC12.57□□□□□ -0.4
CMC4P56277 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.57□□□□□ -0.4
CMC4P56277 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.57□□□□□ -0.4
CMC4P56277 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CMC4P56277 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CMC4P56277 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
CMC4P56277 AC131009.4-201ENST00000624048 1740 ntBASIC12.57□□□□□ -0.4
CMC4P56277 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CMC4P56277 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.56□□□□□ -0.4
CMC4P56277 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 LINC00895-201ENST00000629028 1637 ntBASIC12.56□□□□□ -0.4
CMC4P56277 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 PMS2P4-201ENST00000412466 1052 ntBASIC12.56□□□□□ -0.4
CMC4P56277 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CMC4P56277 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.56□□□□□ -0.4
CMC4P56277 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.56□□□□□ -0.4
CMC4P56277 DNAJB3-201ENST00000446806 729 ntBASIC12.56□□□□□ -0.4
CMC4P56277 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.56□□□□□ -0.4
CMC4P56277 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.56□□□□□ -0.4
CMC4P56277 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 MTDHP5-201ENST00000598980 586 ntBASIC12.56□□□□□ -0.4
CMC4P56277 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
CMC4P56277 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.56□□□□□ -0.4
CMC4P56277 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CMC4P56277 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CMC4P56277 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
CMC4P56277 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CMC4P56277 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CMC4P56277 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms