Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
PAX9P55771 AC003669.1-201ENST00000334569 611 ntBASIC13.59□□□□□ -0.23
PAX9P55771 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.59□□□□□ -0.23
PAX9P55771 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.59□□□□□ -0.23
PAX9P55771 AL359075.1-203ENST00000462729 1002 ntBASIC13.59□□□□□ -0.23
PAX9P55771 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.59□□□□□ -0.23
PAX9P55771 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.59□□□□□ -0.23
PAX9P55771 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.59□□□□□ -0.23
PAX9P55771 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.59□□□□□ -0.23
PAX9P55771 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.59□□□□□ -0.23
PAX9P55771 AC012306.2-201ENST00000609350 630 ntBASIC13.59□□□□□ -0.23
PAX9P55771 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.59□□□□□ -0.23
PAX9P55771 AL139011.1-202ENST00000642063 584 ntBASIC13.59□□□□□ -0.23
PAX9P55771 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PAX9P55771 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PAX9P55771 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.59□□□□□ -0.23
PAX9P55771 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.59□□□□□ -0.23
PAX9P55771 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PAX9P55771 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
PAX9P55771 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
PAX9P55771 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PAX9P55771 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.59□□□□□ -0.23
PAX9P55771 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PAX9P55771 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PAX9P55771 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PAX9P55771 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.58□□□□□ -0.23
PAX9P55771 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PAX9P55771 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PAX9P55771 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PAX9P55771 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PAX9P55771 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PAX9P55771 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX9P55771 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.58□□□□□ -0.24
PAX9P55771 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX9P55771 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 RN7SL606P-201ENST00000472779 293 ntBASIC13.58□□□□□ -0.24
PAX9P55771 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.58□□□□□ -0.24
PAX9P55771 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.58□□□□□ -0.24
PAX9P55771 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.58□□□□□ -0.24
PAX9P55771 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.58□□□□□ -0.24
PAX9P55771 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX9P55771 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX9P55771 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.58□□□□□ -0.24
PAX9P55771 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.58□□□□□ -0.24
PAX9P55771 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
PAX9P55771 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PAX9P55771 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.58□□□□□ -0.24
PAX9P55771 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
PAX9P55771 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 TSPY26P-202ENST00000565928 3884 ntBASIC13.58□□□□□ -0.24
PAX9P55771 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.58□□□□□ -0.24
PAX9P55771 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
PAX9P55771 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX9P55771 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.58□□□□□ -0.24
PAX9P55771 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
PAX9P55771 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PAX9P55771 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 AL021920.2-201ENST00000624828 1351 ntBASIC13.58□□□□□ -0.24
PAX9P55771 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PAX9P55771 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.57□□□□□ -0.24
PAX9P55771 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
PAX9P55771 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 GGT3P-204ENST00000453783 1664 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms