Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL645728.1-201ENST00000366221 2101 ntBASIC15.8■□□□□ 0.12
CDH12P55289 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH12P55289 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH12P55289 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDH12P55289 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH12P55289 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDH12P55289 INTS4P1-201ENST00000438455 1935 ntBASIC15.8■□□□□ 0.12
CDH12P55289 AL391256.1-201ENST00000443260 1855 ntBASIC15.8■□□□□ 0.12
CDH12P55289 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDH12P55289 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH12P55289 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDH12P55289 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH12P55289 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDH12P55289 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH12P55289 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH12P55289 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH12P55289 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH12P55289 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 AC132872.4-202ENST00000622924 2756 ntBASIC15.79■□□□□ 0.12
CDH12P55289 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CDH12P55289 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH12P55289 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.79■□□□□ 0.12
CDH12P55289 IGHV3-47-201ENST00000425060 335 ntBASIC15.79■□□□□ 0.12
CDH12P55289 AP002490.2-201ENST00000524791 560 ntBASIC15.79■□□□□ 0.12
CDH12P55289 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH12P55289 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH12P55289 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH12P55289 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH12P55289 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDH12P55289 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH12P55289 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH12P55289 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH12P55289 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH12P55289 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH12P55289 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.79■□□□□ 0.12
CDH12P55289 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDH12P55289 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH12P55289 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDH12P55289 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CDH12P55289 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CDH12P55289 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH12P55289 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH12P55289 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH12P55289 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH12P55289 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH12P55289 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CDH12P55289 RCN1P2-201ENST00000398357 915 ntBASIC15.78■□□□□ 0.12
CDH12P55289 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.78■□□□□ 0.12
CDH12P55289 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.78■□□□□ 0.12
CDH12P55289 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.78■□□□□ 0.12
CDH12P55289 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH12P55289 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH12P55289 AP000550.4-202ENST00000639755 178 ntBASIC15.78■□□□□ 0.12
CDH12P55289 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH12P55289 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH12P55289 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH12P55289 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDH12P55289 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDH12P55289 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH12P55289 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CDH12P55289 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDH12P55289 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH12P55289 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CDH12P55289 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms