Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH8P55286 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH8P55286 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 AC006277.1-201ENST00000624348 1610 ntBASIC17.99■□□□□ 0.47
CDH8P55286 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDH8P55286 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH8P55286 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH8P55286 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH8P55286 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.99■□□□□ 0.47
CDH8P55286 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CDH8P55286 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 PDPK2P-202ENST00000562415 1191 ntBASIC17.99■□□□□ 0.47
CDH8P55286 AC091167.2-201ENST00000579581 588 ntBASIC17.99■□□□□ 0.47
CDH8P55286 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH8P55286 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH8P55286 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.99■□□□□ 0.47
CDH8P55286 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.99■□□□□ 0.47
CDH8P55286 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH8P55286 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDH8P55286 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 AC011676.5-201ENST00000624864 2660 ntBASIC17.99■□□□□ 0.47
CDH8P55286 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH8P55286 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH8P55286 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH8P55286 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH8P55286 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH8P55286 AC074386.1-202ENST00000463561 864 ntBASIC17.98■□□□□ 0.47
CDH8P55286 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH8P55286 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 CYP2A7P1-201ENST00000595391 815 ntBASIC17.98■□□□□ 0.47
CDH8P55286 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 AL603756.1-201ENST00000606511 2163 ntBASIC17.98■□□□□ 0.47
CDH8P55286 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CDH8P55286 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH8P55286 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH8P55286 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 FLJ38576-201ENST00000623820 2459 ntBASIC17.97■□□□□ 0.47
CDH8P55286 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH8P55286 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
CDH8P55286 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CDH8P55286 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.97■□□□□ 0.47
CDH8P55286 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDH8P55286 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CDH8P55286 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CDH8P55286 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH8P55286 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH8P55286 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH8P55286 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
CDH8P55286 AC087641.1-201ENST00000557561 1021 ntBASIC17.97■□□□□ 0.47
CDH8P55286 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.97■□□□□ 0.47
CDH8P55286 AL031432.2-201ENST00000566714 459 ntBASIC17.97■□□□□ 0.47
CDH8P55286 AC002347.1-201ENST00000569543 541 ntBASIC17.97■□□□□ 0.47
CDH8P55286 AL928711.1-201ENST00000570165 459 ntBASIC17.97■□□□□ 0.47
CDH8P55286 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 GPALPP1-207ENST00000611650 899 ntBASIC17.97■□□□□ 0.47
CDH8P55286 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDH8P55286 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CDH8P55286 LINC00895-201ENST00000629028 1637 ntBASIC17.97■□□□□ 0.47
CDH8P55286 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 UBALD1-205ENST00000590891 2641 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms