Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.09■□□□□ 0.17
NR1H2P55055 KRT8P26-201ENST00000534154 1276 ntBASIC16.09■□□□□ 0.17
NR1H2P55055 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.09■□□□□ 0.17
NR1H2P55055 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 AC092329.2-201ENST00000598402 547 ntBASIC16.09■□□□□ 0.17
NR1H2P55055 AC010240.3-201ENST00000607688 395 ntBASIC16.09■□□□□ 0.17
NR1H2P55055 NPAP1P7-201ENST00000613027 823 ntBASIC16.09■□□□□ 0.17
NR1H2P55055 AC116407.2-201ENST00000613639 860 ntBASIC16.09■□□□□ 0.17
NR1H2P55055 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H2P55055 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NR1H2P55055 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 AL391807.1-203ENST00000604392 2365 ntBASIC16.09■□□□□ 0.17
NR1H2P55055 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H2P55055 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NR1H2P55055 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NR1H2P55055 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
NR1H2P55055 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.09■□□□□ 0.17
NR1H2P55055 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NR1H2P55055 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.08■□□□□ 0.17
NR1H2P55055 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
NR1H2P55055 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NR1H2P55055 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
NR1H2P55055 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.08■□□□□ 0.17
NR1H2P55055 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NR1H2P55055 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
NR1H2P55055 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.08■□□□□ 0.16
NR1H2P55055 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NR1H2P55055 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.08■□□□□ 0.16
NR1H2P55055 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
NR1H2P55055 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.08■□□□□ 0.16
NR1H2P55055 MIR3652-201ENST00000579335 131 ntBASIC16.08■□□□□ 0.16
NR1H2P55055 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.08■□□□□ 0.16
NR1H2P55055 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.08■□□□□ 0.16
NR1H2P55055 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
NR1H2P55055 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.08■□□□□ 0.16
NR1H2P55055 NFIC-211ENST00000641145 8399 ntBASIC16.08■□□□□ 0.16
NR1H2P55055 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
NR1H2P55055 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NR1H2P55055 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.07■□□□□ 0.16
NR1H2P55055 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.07■□□□□ 0.16
NR1H2P55055 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.07■□□□□ 0.16
NR1H2P55055 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 MIR662-201ENST00000384847 95 ntBASIC16.07■□□□□ 0.16
NR1H2P55055 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 PRELID1P1-202ENST00000567272 903 ntBASIC16.07■□□□□ 0.16
NR1H2P55055 AC092119.3-201ENST00000612618 583 ntBASIC16.07■□□□□ 0.16
NR1H2P55055 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.07■□□□□ 0.16
NR1H2P55055 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.07■□□□□ 0.16
NR1H2P55055 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NR1H2P55055 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR1H2P55055 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms