Protein–RNA interactions for Protein: P53367

ARFIP1, Arfaptin-1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1P53367 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFIP1P53367 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFIP1P53367 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ARFIP1P53367 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFIP1P53367 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.07■□□□□ 0.16
ARFIP1P53367 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.07■□□□□ 0.16
ARFIP1P53367 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARFIP1P53367 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFIP1P53367 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ARFIP1P53367 AL645728.1-201ENST00000366221 2101 ntBASIC16.07■□□□□ 0.16
ARFIP1P53367 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.07■□□□□ 0.16
ARFIP1P53367 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.07■□□□□ 0.16
ARFIP1P53367 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.07■□□□□ 0.16
ARFIP1P53367 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ARFIP1P53367 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFIP1P53367 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ARFIP1P53367 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
ARFIP1P53367 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
ARFIP1P53367 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ARFIP1P53367 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.06■□□□□ 0.16
ARFIP1P53367 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.06■□□□□ 0.16
ARFIP1P53367 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.06■□□□□ 0.16
ARFIP1P53367 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ARFIP1P53367 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ARFIP1P53367 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.06■□□□□ 0.16
ARFIP1P53367 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.06■□□□□ 0.16
ARFIP1P53367 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.06■□□□□ 0.16
ARFIP1P53367 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.06■□□□□ 0.16
ARFIP1P53367 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.06■□□□□ 0.16
ARFIP1P53367 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.06■□□□□ 0.16
ARFIP1P53367 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.06■□□□□ 0.16
ARFIP1P53367 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.06■□□□□ 0.16
ARFIP1P53367 AC107918.2-201ENST00000530817 355 ntBASIC16.06■□□□□ 0.16
ARFIP1P53367 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.06■□□□□ 0.16
ARFIP1P53367 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.06■□□□□ 0.16
ARFIP1P53367 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.06■□□□□ 0.16
ARFIP1P53367 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.06■□□□□ 0.16
ARFIP1P53367 AC117500.6-201ENST00000624871 588 ntBASIC16.06■□□□□ 0.16
ARFIP1P53367 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ARFIP1P53367 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 AC106886.4-201ENST00000623557 2502 ntBASIC16.06■□□□□ 0.16
ARFIP1P53367 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ARFIP1P53367 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 AC078925.2-201ENST00000624013 1973 ntBASIC16.06■□□□□ 0.16
ARFIP1P53367 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFIP1P53367 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ARFIP1P53367 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.05■□□□□ 0.16
ARFIP1P53367 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.05■□□□□ 0.16
ARFIP1P53367 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.05■□□□□ 0.16
ARFIP1P53367 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 MRPL3P1-201ENST00000400109 1033 ntBASIC16.05■□□□□ 0.16
ARFIP1P53367 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 AC108073.2-201ENST00000464002 357 ntBASIC16.05■□□□□ 0.16
ARFIP1P53367 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.05■□□□□ 0.16
ARFIP1P53367 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.05■□□□□ 0.16
ARFIP1P53367 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.05■□□□□ 0.16
ARFIP1P53367 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ARFIP1P53367 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ARFIP1P53367 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ARFIP1P53367 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.05■□□□□ 0.16
ARFIP1P53367 AP001350.2-201ENST00000625104 1094 ntBASIC16.05■□□□□ 0.16
ARFIP1P53367 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.05■□□□□ 0.16
ARFIP1P53367 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
ARFIP1P53367 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ARFIP1P53367 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFIP1P53367 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
ARFIP1P53367 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARFIP1P53367 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.04■□□□□ 0.16
ARFIP1P53367 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARFIP1P53367 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms