Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF144AP50876 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF144AP50876 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.75■□□□□ 0.11
RNF144AP50876 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF144AP50876 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF144AP50876 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF144AP50876 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
RNF144AP50876 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF144AP50876 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF144AP50876 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF144AP50876 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF144AP50876 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF144AP50876 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF144AP50876 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RNF144AP50876 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF144AP50876 ELK2BP-201ENST00000415014 1224 ntBASIC15.74■□□□□ 0.11
RNF144AP50876 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RNF144AP50876 ACTG1P4-201ENST00000425123 1122 ntBASIC15.74■□□□□ 0.11
RNF144AP50876 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF144AP50876 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF144AP50876 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.74■□□□□ 0.11
RNF144AP50876 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF144AP50876 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.74■□□□□ 0.11
RNF144AP50876 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF144AP50876 AL353135.1-201ENST00000606729 504 ntBASIC15.74■□□□□ 0.11
RNF144AP50876 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF144AP50876 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF144AP50876 NCF1C-201ENST00000438382 1427 ntBASIC15.74■□□□□ 0.11
RNF144AP50876 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF144AP50876 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 AC006504.4-201ENST00000592118 1568 ntBASIC15.74■□□□□ 0.11
RNF144AP50876 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF144AP50876 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RNF144AP50876 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF144AP50876 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF144AP50876 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF144AP50876 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RNF144AP50876 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF144AP50876 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 AL590787.1-201ENST00000568856 1315 ntBASIC15.73■□□□□ 0.11
RNF144AP50876 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF144AP50876 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF144AP50876 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF144AP50876 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF144AP50876 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 AL450487.1-201ENST00000426799 995 ntBASIC15.73■□□□□ 0.11
RNF144AP50876 HNRNPDP1-201ENST00000439535 754 ntBASIC15.73■□□□□ 0.11
RNF144AP50876 SCARNA2-201ENST00000458748 420 ntBASIC15.73■□□□□ 0.11
RNF144AP50876 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF144AP50876 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF144AP50876 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms