Protein–RNA interactions for Protein: P42263

GRIA3, Glutamate receptor 3, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3P42263 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA3P42263 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GRIA3P42263 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 AC016396.2-201ENST00000562575 1417 ntBASIC16.71■□□□□ 0.27
GRIA3P42263 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 RNA5SP419-201ENST00000515908 135 ntBASIC16.71■□□□□ 0.27
GRIA3P42263 OR7E14P-202ENST00000530490 1290 ntBASIC16.71■□□□□ 0.27
GRIA3P42263 AP001005.1-201ENST00000571755 1248 ntBASIC16.71■□□□□ 0.27
GRIA3P42263 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.71■□□□□ 0.27
GRIA3P42263 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GRIA3P42263 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GRIA3P42263 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.71■□□□□ 0.27
GRIA3P42263 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GRIA3P42263 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.71■□□□□ 0.27
GRIA3P42263 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GRIA3P42263 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GRIA3P42263 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.71■□□□□ 0.26
GRIA3P42263 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA3P42263 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA3P42263 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
GRIA3P42263 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GRIA3P42263 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIA3P42263 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIA3P42263 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.7■□□□□ 0.26
GRIA3P42263 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA3P42263 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIA3P42263 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA3P42263 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIA3P42263 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA3P42263 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIA3P42263 FAM215A-202ENST00000632077 792 ntBASIC16.7■□□□□ 0.26
GRIA3P42263 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GRIA3P42263 AC107918.4-202ENST00000641623 219 ntBASIC16.7■□□□□ 0.26
GRIA3P42263 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA3P42263 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA3P42263 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA3P42263 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA3P42263 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
GRIA3P42263 AC097637.2-201ENST00000624096 1997 ntBASIC16.69■□□□□ 0.26
GRIA3P42263 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA3P42263 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GRIA3P42263 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GRIA3P42263 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA3P42263 AL135999.2-201ENST00000622438 1686 ntBASIC16.69■□□□□ 0.26
GRIA3P42263 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.69■□□□□ 0.26
GRIA3P42263 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA3P42263 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
GRIA3P42263 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA3P42263 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.69■□□□□ 0.26
GRIA3P42263 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA3P42263 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIA3P42263 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.69■□□□□ 0.26
GRIA3P42263 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA3P42263 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms