Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 AC139713.2-201ENST00000641328 2723 ntBASIC19.24■□□□□ 0.67
COPB2P35606 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.24■□□□□ 0.67
COPB2P35606 AC116353.5-201ENST00000638148 1699 ntBASIC19.24■□□□□ 0.67
COPB2P35606 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COPB2P35606 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COPB2P35606 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.24■□□□□ 0.67
COPB2P35606 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.24■□□□□ 0.67
COPB2P35606 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.24■□□□□ 0.67
COPB2P35606 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.24■□□□□ 0.67
COPB2P35606 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.24■□□□□ 0.67
COPB2P35606 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.24■□□□□ 0.67
COPB2P35606 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
COPB2P35606 AL158211.3-201ENST00000607385 239 ntBASIC19.24■□□□□ 0.67
COPB2P35606 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
COPB2P35606 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COPB2P35606 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COPB2P35606 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COPB2P35606 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPB2P35606 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.24■□□□□ 0.67
COPB2P35606 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.24■□□□□ 0.67
COPB2P35606 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
COPB2P35606 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.23■□□□□ 0.67
COPB2P35606 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.23■□□□□ 0.67
COPB2P35606 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.23■□□□□ 0.67
COPB2P35606 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
COPB2P35606 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.23■□□□□ 0.67
COPB2P35606 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
COPB2P35606 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COPB2P35606 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.23■□□□□ 0.67
COPB2P35606 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.23■□□□□ 0.67
COPB2P35606 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.23■□□□□ 0.67
COPB2P35606 ALG1L8P-201ENST00000533887 760 ntBASIC19.23■□□□□ 0.67
COPB2P35606 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.23■□□□□ 0.67
COPB2P35606 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.23■□□□□ 0.67
COPB2P35606 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.23■□□□□ 0.67
COPB2P35606 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.23■□□□□ 0.67
COPB2P35606 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.23■□□□□ 0.67
COPB2P35606 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPB2P35606 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
COPB2P35606 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COPB2P35606 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 AC106820.2-201ENST00000563775 3264 ntBASIC19.22■□□□□ 0.67
COPB2P35606 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
COPB2P35606 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COPB2P35606 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
COPB2P35606 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.22■□□□□ 0.67
COPB2P35606 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.22■□□□□ 0.67
COPB2P35606 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.22■□□□□ 0.67
COPB2P35606 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 MIR6080-201ENST00000617359 66 ntBASIC19.22■□□□□ 0.67
COPB2P35606 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.22■□□□□ 0.67
COPB2P35606 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.22■□□□□ 0.67
COPB2P35606 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.22■□□□□ 0.67
COPB2P35606 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COPB2P35606 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPB2P35606 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms