Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS2P33552 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS2P33552 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 IGHV3-52-201ENST00000519770 353 ntBASIC12.48□□□□□ -0.41
CKS2P33552 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 AC024563.2-201ENST00000603282 481 ntBASIC12.48□□□□□ -0.41
CKS2P33552 AC006058.3-201ENST00000606217 1069 ntBASIC12.48□□□□□ -0.41
CKS2P33552 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS2P33552 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS2P33552 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CKS2P33552 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 AC092338.2-201ENST00000568827 1415 ntBASIC12.47□□□□□ -0.41
CKS2P33552 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
CKS2P33552 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.47□□□□□ -0.41
CKS2P33552 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CKS2P33552 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.47□□□□□ -0.41
CKS2P33552 AL355802.2-201ENST00000402069 882 ntBASIC12.47□□□□□ -0.41
CKS2P33552 TSPY12P-201ENST00000421279 868 ntBASIC12.47□□□□□ -0.41
CKS2P33552 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CKS2P33552 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.47□□□□□ -0.41
CKS2P33552 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.47□□□□□ -0.41
CKS2P33552 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 AC116562.4-202ENST00000641738 218 ntBASIC12.47□□□□□ -0.41
CKS2P33552 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.47□□□□□ -0.41
CKS2P33552 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CKS2P33552 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CKS2P33552 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CKS2P33552 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
CKS2P33552 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CKS2P33552 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CKS2P33552 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms