Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.49■□□□□ 0.23
EPHA3P29320 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.49■□□□□ 0.23
EPHA3P29320 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 AC091607.1-201ENST00000490318 1060 ntBASIC16.49■□□□□ 0.23
EPHA3P29320 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA3P29320 AC009533.2-201ENST00000543664 586 ntBASIC16.49■□□□□ 0.23
EPHA3P29320 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.49■□□□□ 0.23
EPHA3P29320 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA3P29320 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
EPHA3P29320 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA3P29320 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA3P29320 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA3P29320 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
EPHA3P29320 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA3P29320 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
EPHA3P29320 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.48■□□□□ 0.23
EPHA3P29320 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHA3P29320 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHA3P29320 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 MTHFR-217ENST00000641820 1569 ntBASIC16.48■□□□□ 0.23
EPHA3P29320 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
EPHA3P29320 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.48■□□□□ 0.23
EPHA3P29320 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHA3P29320 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHA3P29320 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EPHA3P29320 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHA3P29320 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
EPHA3P29320 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.48■□□□□ 0.23
EPHA3P29320 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.48■□□□□ 0.23
EPHA3P29320 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.48■□□□□ 0.23
EPHA3P29320 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EPHA3P29320 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA3P29320 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.47■□□□□ 0.23
EPHA3P29320 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 AC006538.1-201ENST00000567905 1585 ntBASIC16.47■□□□□ 0.23
EPHA3P29320 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.47■□□□□ 0.23
EPHA3P29320 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHA3P29320 AL671277.2-201ENST00000458060 996 ntBASIC16.47■□□□□ 0.23
EPHA3P29320 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
EPHA3P29320 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHA3P29320 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHA3P29320 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 AC011498.5-201ENST00000592027 486 ntBASIC16.47■□□□□ 0.23
EPHA3P29320 AC011467.2-201ENST00000598425 242 ntBASIC16.47■□□□□ 0.23
EPHA3P29320 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHA3P29320 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHA3P29320 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms