Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.52■□□□□ 0.24
SDHBP21912 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SDHBP21912 AC002558.1-201ENST00000488906 803 ntBASIC16.52■□□□□ 0.24
SDHBP21912 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.52■□□□□ 0.24
SDHBP21912 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.52■□□□□ 0.24
SDHBP21912 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
SDHBP21912 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SDHBP21912 AC027307.2-201ENST00000591252 911 ntBASIC16.52■□□□□ 0.24
SDHBP21912 AL138828.2-201ENST00000615812 383 ntBASIC16.52■□□□□ 0.24
SDHBP21912 COX11-210ENST00000639671 696 ntBASIC16.52■□□□□ 0.24
SDHBP21912 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SDHBP21912 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SDHBP21912 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SDHBP21912 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SDHBP21912 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.52■□□□□ 0.23
SDHBP21912 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.52■□□□□ 0.23
SDHBP21912 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SDHBP21912 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SDHBP21912 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
SDHBP21912 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SDHBP21912 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SDHBP21912 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 AC087499.5-201ENST00000452760 1342 ntBASIC16.51■□□□□ 0.23
SDHBP21912 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.51■□□□□ 0.23
SDHBP21912 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.51■□□□□ 0.23
SDHBP21912 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.51■□□□□ 0.23
SDHBP21912 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.51■□□□□ 0.23
SDHBP21912 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.51■□□□□ 0.23
SDHBP21912 TMEM261P1-201ENST00000604899 340 ntBASIC16.51■□□□□ 0.23
SDHBP21912 AC007967.4-201ENST00000614700 386 ntBASIC16.51■□□□□ 0.23
SDHBP21912 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SDHBP21912 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.51■□□□□ 0.23
SDHBP21912 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.51■□□□□ 0.23
SDHBP21912 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.51■□□□□ 0.23
SDHBP21912 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SDHBP21912 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.51■□□□□ 0.23
SDHBP21912 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SDHBP21912 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SDHBP21912 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SDHBP21912 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SDHBP21912 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SDHBP21912 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SDHBP21912 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SDHBP21912 HCG11-201ENST00000411553 5696 ntBASIC16.5■□□□□ 0.23
SDHBP21912 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SDHBP21912 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SDHBP21912 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SDHBP21912 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SDHBP21912 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SDHBP21912 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.5■□□□□ 0.23
SDHBP21912 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.5■□□□□ 0.23
SDHBP21912 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SDHBP21912 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SDHBP21912 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.5■□□□□ 0.23
SDHBP21912 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SDHBP21912 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.5■□□□□ 0.23
SDHBP21912 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.5■□□□□ 0.23
SDHBP21912 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.5■□□□□ 0.23
SDHBP21912 AC103810.3-201ENST00000583567 96 ntBASIC16.5■□□□□ 0.23
SDHBP21912 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.5■□□□□ 0.23
SDHBP21912 SPDYE12P-201ENST00000618416 771 ntBASIC16.5■□□□□ 0.23
SDHBP21912 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.5■□□□□ 0.23
SDHBP21912 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms