Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.05■□□□□ 0.32
VCLP18206 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 HNRNPDP1-201ENST00000439535 754 ntBASIC17.05■□□□□ 0.32
VCLP18206 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VCLP18206 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.05■□□□□ 0.32
VCLP18206 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.05■□□□□ 0.32
VCLP18206 PGM5P2-202ENST00000637225 1043 ntBASIC17.05■□□□□ 0.32
VCLP18206 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VCLP18206 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
VCLP18206 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCLP18206 LINC00554-201ENST00000564841 3011 ntBASIC17.05■□□□□ 0.32
VCLP18206 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VCLP18206 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VCLP18206 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.04■□□□□ 0.32
VCLP18206 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VCLP18206 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.04■□□□□ 0.32
VCLP18206 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VCLP18206 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.04■□□□□ 0.32
VCLP18206 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.04■□□□□ 0.32
VCLP18206 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.04■□□□□ 0.32
VCLP18206 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
VCLP18206 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.04■□□□□ 0.32
VCLP18206 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.04■□□□□ 0.32
VCLP18206 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.04■□□□□ 0.32
VCLP18206 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.04■□□□□ 0.32
VCLP18206 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.04■□□□□ 0.32
VCLP18206 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VCLP18206 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VCLP18206 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VCLP18206 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.04■□□□□ 0.32
VCLP18206 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCLP18206 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.03■□□□□ 0.32
VCLP18206 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VCLP18206 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.03■□□□□ 0.32
VCLP18206 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.03■□□□□ 0.32
VCLP18206 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VCLP18206 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 ACTG1P4-201ENST00000425123 1122 ntBASIC17.03■□□□□ 0.32
VCLP18206 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.03■□□□□ 0.32
VCLP18206 RNA5SP419-201ENST00000515908 135 ntBASIC17.03■□□□□ 0.32
VCLP18206 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.03■□□□□ 0.32
VCLP18206 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
VCLP18206 MIR7706-201ENST00000613747 67 ntBASIC17.03■□□□□ 0.32
VCLP18206 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.03■□□□□ 0.32
VCLP18206 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.03■□□□□ 0.32
VCLP18206 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.03■□□□□ 0.32
VCLP18206 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms