Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TUBB7P-202ENST00000428444 1305 ntBASIC20.31■□□□□ 0.84
COL11A2P13942 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL11A2P13942 TUBB8P7-204ENST00000567960 1332 ntBASIC20.31■□□□□ 0.84
COL11A2P13942 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.31■□□□□ 0.84
COL11A2P13942 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.31■□□□□ 0.84
COL11A2P13942 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.31■□□□□ 0.84
COL11A2P13942 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.31■□□□□ 0.84
COL11A2P13942 AC011495.1-201ENST00000498085 584 ntBASIC20.31■□□□□ 0.84
COL11A2P13942 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL11A2P13942 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
COL11A2P13942 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL11A2P13942 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
COL11A2P13942 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.31■□□□□ 0.84
COL11A2P13942 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.31■□□□□ 0.84
COL11A2P13942 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COL11A2P13942 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.31■□□□□ 0.84
COL11A2P13942 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL11A2P13942 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL11A2P13942 REXO1L6P-201ENST00000603433 1515 ntBASIC20.31■□□□□ 0.84
COL11A2P13942 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL11A2P13942 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL11A2P13942 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL11A2P13942 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.3■□□□□ 0.84
COL11A2P13942 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.3■□□□□ 0.84
COL11A2P13942 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.3■□□□□ 0.84
COL11A2P13942 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.3■□□□□ 0.84
COL11A2P13942 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.3■□□□□ 0.84
COL11A2P13942 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COL11A2P13942 BNIP3P42-201ENST00000454982 569 ntBASIC20.3■□□□□ 0.84
COL11A2P13942 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.3■□□□□ 0.84
COL11A2P13942 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.3■□□□□ 0.84
COL11A2P13942 BNIP3P29-201ENST00000598302 571 ntBASIC20.3■□□□□ 0.84
COL11A2P13942 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.3■□□□□ 0.84
COL11A2P13942 AC011447.5-201ENST00000616168 564 ntBASIC20.3■□□□□ 0.84
COL11A2P13942 COX11-210ENST00000639671 696 ntBASIC20.3■□□□□ 0.84
COL11A2P13942 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.3■□□□□ 0.84
COL11A2P13942 AC008764.6-201ENST00000595909 2069 ntBASIC20.3■□□□□ 0.84
COL11A2P13942 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COL11A2P13942 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL11A2P13942 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.3■□□□□ 0.84
COL11A2P13942 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COL11A2P13942 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
COL11A2P13942 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.3■□□□□ 0.84
COL11A2P13942 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.3■□□□□ 0.84
COL11A2P13942 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.3■□□□□ 0.84
COL11A2P13942 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.3■□□□□ 0.84
COL11A2P13942 AL391069.4-201ENST00000609583 481 ntBASIC20.3■□□□□ 0.84
COL11A2P13942 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.3■□□□□ 0.84
COL11A2P13942 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.3■□□□□ 0.84
COL11A2P13942 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL11A2P13942 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COL11A2P13942 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.29■□□□□ 0.84
COL11A2P13942 MYCLP2-201ENST00000449268 967 ntBASIC20.29■□□□□ 0.84
COL11A2P13942 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.29■□□□□ 0.84
COL11A2P13942 AL033527.5-202ENST00000641632 1098 ntBASIC20.29■□□□□ 0.84
COL11A2P13942 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.29■□□□□ 0.84
COL11A2P13942 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
COL11A2P13942 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL11A2P13942 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.29■□□□□ 0.84
COL11A2P13942 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.29■□□□□ 0.84
COL11A2P13942 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL11A2P13942 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.29■□□□□ 0.84
COL11A2P13942 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.28■□□□□ 0.84
COL11A2P13942 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL11A2P13942 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.28■□□□□ 0.84
COL11A2P13942 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
COL11A2P13942 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.28■□□□□ 0.84
COL11A2P13942 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 AC245100.3-201ENST00000441281 285 ntBASIC20.28■□□□□ 0.84
COL11A2P13942 CROCCP4-201ENST00000457096 498 ntBASIC20.28■□□□□ 0.84
COL11A2P13942 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.28■□□□□ 0.84
COL11A2P13942 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.28■□□□□ 0.84
COL11A2P13942 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.28■□□□□ 0.84
COL11A2P13942 MIR6775-201ENST00000617557 69 ntBASIC20.28■□□□□ 0.84
COL11A2P13942 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.28■□□□□ 0.84
COL11A2P13942 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL11A2P13942 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms