Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CD28P10747 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 MIR770-201ENST00000390219 98 ntBASIC13.21□□□□□ -0.29
CD28P10747 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.21□□□□□ -0.29
CD28P10747 AL355306.1-201ENST00000415580 579 ntBASIC13.21□□□□□ -0.29
CD28P10747 SLC25A6P5-201ENST00000435663 894 ntBASIC13.21□□□□□ -0.29
CD28P10747 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 SPDYE11-202ENST00000450699 704 ntBASIC13.21□□□□□ -0.29
CD28P10747 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.21□□□□□ -0.29
CD28P10747 AC023141.5-201ENST00000458585 616 ntBASIC13.21□□□□□ -0.29
CD28P10747 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CD28P10747 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.21□□□□□ -0.29
CD28P10747 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.21□□□□□ -0.29
CD28P10747 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.21□□□□□ -0.29
CD28P10747 SPDYE9P-201ENST00000570642 692 ntBASIC13.21□□□□□ -0.29
CD28P10747 MIR4515-201ENST00000584082 81 ntBASIC13.21□□□□□ -0.29
CD28P10747 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.21□□□□□ -0.29
CD28P10747 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CD28P10747 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 AC099522.2-201ENST00000607001 744 ntBASIC13.21□□□□□ -0.29
CD28P10747 AC026120.1-201ENST00000611536 926 ntBASIC13.21□□□□□ -0.29
CD28P10747 SPDYE10P-202ENST00000612005 668 ntBASIC13.21□□□□□ -0.29
CD28P10747 SPDYE8P-202ENST00000612377 668 ntBASIC13.21□□□□□ -0.29
CD28P10747 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CD28P10747 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
CD28P10747 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD28P10747 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CD28P10747 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD28P10747 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD28P10747 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.21□□□□□ -0.3
CD28P10747 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.2□□□□□ -0.3
CD28P10747 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 ADH5P3-201ENST00000433842 1137 ntBASIC13.2□□□□□ -0.3
CD28P10747 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 KRT8P48-201ENST00000515599 1220 ntBASIC13.2□□□□□ -0.3
CD28P10747 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.2□□□□□ -0.3
CD28P10747 AC109322.1-201ENST00000524499 1264 ntBASIC13.2□□□□□ -0.3
CD28P10747 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.2□□□□□ -0.3
CD28P10747 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.2□□□□□ -0.3
CD28P10747 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.2□□□□□ -0.3
CD28P10747 LINC00628-201ENST00000628516 1289 ntBASIC13.2□□□□□ -0.3
CD28P10747 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CD28P10747 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.2□□□□□ -0.3
CD28P10747 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD28P10747 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CD28P10747 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 AC067852.2-201ENST00000590513 2313 ntBASIC13.19□□□□□ -0.3
CD28P10747 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.19□□□□□ -0.3
CD28P10747 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CD28P10747 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.19□□□□□ -0.3
CD28P10747 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms