Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 AC008608.2-201ENST00000606089 416 ntBASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 AL022326.1-202ENST00000641533 845 ntBASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV3-43DP0DP04 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 NCF1C-201ENST00000438382 1427 ntBASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV3-43DP0DP04 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 RBM17P3-201ENST00000417687 1192 ntBASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 TSPY19P-201ENST00000418461 509 ntBASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 TSPY18P-201ENST00000441642 509 ntBASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 SART3-203ENST00000546611 1184 ntBASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 AL139288.1-201ENST00000623748 933 ntBASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 AL662844.4-201ENST00000606367 2838 ntBASIC14.06□□□□□ -0.16
IGHV3-43DP0DP04 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms