Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC172P0C7W6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 AP005117.1-201ENST00000584346 1413 ntBASIC18.32■□□□□ 0.52
CCDC172P0C7W6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 RNF216P1-203ENST00000404404 2427 ntBASIC18.32■□□□□ 0.52
CCDC172P0C7W6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC172P0C7W6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 AL603756.1-201ENST00000606511 2163 ntBASIC18.31■□□□□ 0.52
CCDC172P0C7W6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 PCDHB17P-201ENST00000539533 2393 ntBASIC18.31■□□□□ 0.52
CCDC172P0C7W6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 ARMC10P1-201ENST00000313754 855 ntBASIC18.31■□□□□ 0.52
CCDC172P0C7W6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 KRT18P35-201ENST00000510488 1269 ntBASIC18.31■□□□□ 0.52
CCDC172P0C7W6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 UBALD1-205ENST00000590891 2641 ntBASIC18.31■□□□□ 0.52
CCDC172P0C7W6 AC004817.3-201ENST00000602957 2129 ntBASIC18.31■□□□□ 0.52
CCDC172P0C7W6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC172P0C7W6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 AP002414.1-201ENST00000391405 1147 ntBASIC18.3■□□□□ 0.52
CCDC172P0C7W6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC172P0C7W6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms