Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HOXC4P09017 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.38■□□□□ 0.21
HOXC4P09017 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HOXC4P09017 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.38■□□□□ 0.21
HOXC4P09017 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.38■□□□□ 0.21
HOXC4P09017 AC069262.1-201ENST00000539058 672 ntBASIC16.38■□□□□ 0.21
HOXC4P09017 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
HOXC4P09017 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.38■□□□□ 0.21
HOXC4P09017 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.38■□□□□ 0.21
HOXC4P09017 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HOXC4P09017 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HOXC4P09017 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HOXC4P09017 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.38■□□□□ 0.21
HOXC4P09017 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.38■□□□□ 0.21
HOXC4P09017 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HOXC4P09017 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.38■□□□□ 0.21
HOXC4P09017 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HOXC4P09017 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.37■□□□□ 0.21
HOXC4P09017 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
HOXC4P09017 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC4P09017 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
HOXC4P09017 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
HOXC4P09017 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC4P09017 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HOXC4P09017 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.37■□□□□ 0.21
HOXC4P09017 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HOXC4P09017 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.37■□□□□ 0.21
HOXC4P09017 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.37■□□□□ 0.21
HOXC4P09017 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
HOXC4P09017 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.37■□□□□ 0.21
HOXC4P09017 RBPMS2P1-201ENST00000437762 623 ntBASIC16.37■□□□□ 0.21
HOXC4P09017 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.37■□□□□ 0.21
HOXC4P09017 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HOXC4P09017 SLC25A39P2-201ENST00000537614 270 ntBASIC16.37■□□□□ 0.21
HOXC4P09017 AL138918.1-201ENST00000568306 659 ntBASIC16.37■□□□□ 0.21
HOXC4P09017 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.37■□□□□ 0.21
HOXC4P09017 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.37■□□□□ 0.21
HOXC4P09017 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC4P09017 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 AL671710.1-201ENST00000610245 2349 ntBASIC16.37■□□□□ 0.21
HOXC4P09017 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC4P09017 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
HOXC4P09017 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC4P09017 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HOXC4P09017 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.37■□□□□ 0.21
HOXC4P09017 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.37■□□□□ 0.21
HOXC4P09017 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC4P09017 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.37■□□□□ 0.21
HOXC4P09017 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HOXC4P09017 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HOXC4P09017 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC4P09017 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC4P09017 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.36■□□□□ 0.21
HOXC4P09017 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC4P09017 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC4P09017 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC4P09017 AL645728.1-201ENST00000366221 2101 ntBASIC16.36■□□□□ 0.21
HOXC4P09017 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC4P09017 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.36■□□□□ 0.21
HOXC4P09017 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC4P09017 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC4P09017 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
HOXC4P09017 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.36■□□□□ 0.21
HOXC4P09017 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HOXC4P09017 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC4P09017 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HOXC4P09017 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC4P09017 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
HOXC4P09017 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms