Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DOAP06340 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOAP06340 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOAP06340 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOAP06340 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DOAP06340 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOAP06340 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOAP06340 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOAP06340 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 AC092053.1-201ENST00000605787 1936 ntBASIC19.81■□□□□ 0.76
HLA-DOAP06340 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 SLC25A39P2-201ENST00000537614 270 ntBASIC19.81■□□□□ 0.76
HLA-DOAP06340 AC069262.1-201ENST00000539058 672 ntBASIC19.81■□□□□ 0.76
HLA-DOAP06340 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 AP000842.3-202ENST00000569238 1080 ntBASIC19.81■□□□□ 0.76
HLA-DOAP06340 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOAP06340 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOAP06340 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 LINC00895-201ENST00000629028 1637 ntBASIC19.8■□□□□ 0.76
HLA-DOAP06340 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 KRT18P34-201ENST00000488218 1270 ntBASIC19.8■□□□□ 0.76
HLA-DOAP06340 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 AC026150.2-201ENST00000564693 1156 ntBASIC19.8■□□□□ 0.76
HLA-DOAP06340 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 AC092364.2-202ENST00000597012 1073 ntBASIC19.8■□□□□ 0.76
HLA-DOAP06340 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOAP06340 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOAP06340 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 TUBB3P1-201ENST00000405796 1332 ntBASIC19.79■□□□□ 0.76
HLA-DOAP06340 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOAP06340 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DOAP06340 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms