Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.23■□□□□ 0.83
CHGBP05060 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.23■□□□□ 0.83
CHGBP05060 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.23■□□□□ 0.83
CHGBP05060 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.23■□□□□ 0.83
CHGBP05060 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.23■□□□□ 0.83
CHGBP05060 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.23■□□□□ 0.83
CHGBP05060 AC091167.2-201ENST00000579581 588 ntBASIC20.23■□□□□ 0.83
CHGBP05060 MIR4469-201ENST00000583919 79 ntBASIC20.23■□□□□ 0.83
CHGBP05060 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.23■□□□□ 0.83
CHGBP05060 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.22■□□□□ 0.83
CHGBP05060 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CHGBP05060 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CHGBP05060 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHGBP05060 HTR5BP-201ENST00000430851 1154 ntBASIC20.22■□□□□ 0.83
CHGBP05060 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.22■□□□□ 0.83
CHGBP05060 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.22■□□□□ 0.83
CHGBP05060 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHGBP05060 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.22■□□□□ 0.83
CHGBP05060 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.22■□□□□ 0.83
CHGBP05060 AC006538.3-201ENST00000612495 578 ntBASIC20.22■□□□□ 0.83
CHGBP05060 LINC00895-201ENST00000629028 1637 ntBASIC20.22■□□□□ 0.83
CHGBP05060 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.22■□□□□ 0.83
CHGBP05060 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHGBP05060 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHGBP05060 TUBB8P12-201ENST00000308911 1335 ntBASIC20.22■□□□□ 0.83
CHGBP05060 TUBB7P-202ENST00000428444 1305 ntBASIC20.22■□□□□ 0.83
CHGBP05060 TUBB8P7-204ENST00000567960 1332 ntBASIC20.22■□□□□ 0.83
CHGBP05060 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHGBP05060 AL512652.2-201ENST00000625156 1716 ntBASIC20.22■□□□□ 0.83
CHGBP05060 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 AC005052.1-201ENST00000625181 2492 ntBASIC20.21■□□□□ 0.83
CHGBP05060 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.21■□□□□ 0.83
CHGBP05060 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CHGBP05060 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CHGBP05060 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.21■□□□□ 0.83
CHGBP05060 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 RNU1-129P-201ENST00000384064 167 ntBASIC20.21■□□□□ 0.83
CHGBP05060 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.21■□□□□ 0.83
CHGBP05060 AC140658.5-201ENST00000438532 169 ntBASIC20.21■□□□□ 0.83
CHGBP05060 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.21■□□□□ 0.83
CHGBP05060 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.21■□□□□ 0.83
CHGBP05060 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
CHGBP05060 U1.21-201ENST00000580816 167 ntBASIC20.21■□□□□ 0.83
CHGBP05060 MTDHP5-201ENST00000598980 586 ntBASIC20.21■□□□□ 0.83
CHGBP05060 C20orf181-201ENST00000623918 480 ntBASIC20.21■□□□□ 0.83
CHGBP05060 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CHGBP05060 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.21■□□□□ 0.83
CHGBP05060 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHGBP05060 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.21■□□□□ 0.83
CHGBP05060 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHGBP05060 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.21■□□□□ 0.83
CHGBP05060 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.2■□□□□ 0.82
CHGBP05060 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.2■□□□□ 0.82
CHGBP05060 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.2■□□□□ 0.82
CHGBP05060 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHGBP05060 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHGBP05060 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.2■□□□□ 0.82
CHGBP05060 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.2■□□□□ 0.82
CHGBP05060 ADH5P3-201ENST00000433842 1137 ntBASIC20.2■□□□□ 0.82
CHGBP05060 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CHGBP05060 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHGBP05060 AC087641.1-201ENST00000557561 1021 ntBASIC20.2■□□□□ 0.82
CHGBP05060 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.2■□□□□ 0.82
CHGBP05060 AL645728.2-201ENST00000641974 660 ntBASIC20.2■□□□□ 0.82
CHGBP05060 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms