Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1RP00736 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C1RP00736 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.74■□□□□ 0.43
C1RP00736 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.74■□□□□ 0.43
C1RP00736 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C1RP00736 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
C1RP00736 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.74■□□□□ 0.43
C1RP00736 SLC22A20-204ENST00000530038 1673 ntBASIC17.74■□□□□ 0.43
C1RP00736 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.73■□□□□ 0.43
C1RP00736 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.73■□□□□ 0.43
C1RP00736 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.73■□□□□ 0.43
C1RP00736 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.73■□□□□ 0.43
C1RP00736 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
C1RP00736 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
C1RP00736 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.73■□□□□ 0.43
C1RP00736 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.73■□□□□ 0.43
C1RP00736 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.73■□□□□ 0.43
C1RP00736 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.73■□□□□ 0.43
C1RP00736 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.73■□□□□ 0.43
C1RP00736 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.73■□□□□ 0.43
C1RP00736 AC027307.2-201ENST00000591252 911 ntBASIC17.73■□□□□ 0.43
C1RP00736 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.73■□□□□ 0.43
C1RP00736 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
C1RP00736 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 AC008677.1-201ENST00000519230 1561 ntBASIC17.73■□□□□ 0.43
C1RP00736 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.73■□□□□ 0.43
C1RP00736 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
C1RP00736 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C1RP00736 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.72■□□□□ 0.43
C1RP00736 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.72■□□□□ 0.43
C1RP00736 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 AL021920.2-201ENST00000624828 1351 ntBASIC17.72■□□□□ 0.43
C1RP00736 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.72■□□□□ 0.43
C1RP00736 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 SLC25A39P2-201ENST00000537614 270 ntBASIC17.72■□□□□ 0.43
C1RP00736 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.72■□□□□ 0.43
C1RP00736 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.72■□□□□ 0.43
C1RP00736 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.72■□□□□ 0.43
C1RP00736 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.72■□□□□ 0.43
C1RP00736 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C1RP00736 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.72■□□□□ 0.43
C1RP00736 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.72■□□□□ 0.43
C1RP00736 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
C1RP00736 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.71■□□□□ 0.43
C1RP00736 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
C1RP00736 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
C1RP00736 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.71■□□□□ 0.43
C1RP00736 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C1RP00736 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.71■□□□□ 0.43
C1RP00736 TERF1P3-201ENST00000505638 1227 ntBASIC17.71■□□□□ 0.43
C1RP00736 AC069120.2-201ENST00000524091 540 ntBASIC17.71■□□□□ 0.43
C1RP00736 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.71■□□□□ 0.43
C1RP00736 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms