Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.7■□□□□ 0.42
TRUB2O95900 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.7■□□□□ 0.42
TRUB2O95900 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TRUB2O95900 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TRUB2O95900 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.69■□□□□ 0.42
TRUB2O95900 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRUB2O95900 IGLL3P-201ENST00000412472 434 ntBASIC17.69■□□□□ 0.42
TRUB2O95900 MED15P5-201ENST00000423150 992 ntBASIC17.69■□□□□ 0.42
TRUB2O95900 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.69■□□□□ 0.42
TRUB2O95900 AC092171.3-201ENST00000610122 2651 ntBASIC17.69■□□□□ 0.42
TRUB2O95900 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRUB2O95900 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.69■□□□□ 0.42
TRUB2O95900 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TRUB2O95900 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRUB2O95900 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRUB2O95900 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.68■□□□□ 0.42
TRUB2O95900 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.68■□□□□ 0.42
TRUB2O95900 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRUB2O95900 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRUB2O95900 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRUB2O95900 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.68■□□□□ 0.42
TRUB2O95900 AL591424.1-201ENST00000442569 1213 ntBASIC17.68■□□□□ 0.42
TRUB2O95900 AL391256.1-201ENST00000443260 1855 ntBASIC17.68■□□□□ 0.42
TRUB2O95900 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.68■□□□□ 0.42
TRUB2O95900 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.68■□□□□ 0.42
TRUB2O95900 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRUB2O95900 KRT18P58-201ENST00000527480 1120 ntBASIC17.68■□□□□ 0.42
TRUB2O95900 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.68■□□□□ 0.42
TRUB2O95900 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.68■□□□□ 0.42
TRUB2O95900 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.68■□□□□ 0.42
TRUB2O95900 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.68■□□□□ 0.42
TRUB2O95900 FAM197Y3-203ENST00000618346 717 ntBASIC17.68■□□□□ 0.42
TRUB2O95900 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.68■□□□□ 0.42
TRUB2O95900 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.68■□□□□ 0.42
TRUB2O95900 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.68■□□□□ 0.42
TRUB2O95900 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRUB2O95900 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.68■□□□□ 0.42
TRUB2O95900 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 AL603756.1-201ENST00000606511 2163 ntBASIC17.67■□□□□ 0.42
TRUB2O95900 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.67■□□□□ 0.42
TRUB2O95900 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
TRUB2O95900 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 MIR940-201ENST00000401276 94 ntBASIC17.67■□□□□ 0.42
TRUB2O95900 PMS2P1-201ENST00000431037 1228 ntBASIC17.67■□□□□ 0.42
TRUB2O95900 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 FAM185BP-201ENST00000443595 716 ntBASIC17.67■□□□□ 0.42
TRUB2O95900 KRT18P2-201ENST00000447938 1258 ntBASIC17.67■□□□□ 0.42
TRUB2O95900 KRT18P3-201ENST00000451602 1288 ntBASIC17.67■□□□□ 0.42
TRUB2O95900 CXCL1P1-201ENST00000502804 216 ntBASIC17.67■□□□□ 0.42
TRUB2O95900 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.67■□□□□ 0.42
TRUB2O95900 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRUB2O95900 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TRUB2O95900 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRUB2O95900 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRUB2O95900 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms