Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.95■□□□□ 0.46
LCA5LO95447 KRT8P39-201ENST00000396270 1433 ntBASIC17.95■□□□□ 0.46
LCA5LO95447 NCF1C-201ENST00000438382 1427 ntBASIC17.95■□□□□ 0.46
LCA5LO95447 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCA5LO95447 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.95■□□□□ 0.46
LCA5LO95447 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.95■□□□□ 0.46
LCA5LO95447 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LCA5LO95447 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LCA5LO95447 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LCA5LO95447 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LCA5LO95447 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.94■□□□□ 0.46
LCA5LO95447 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.94■□□□□ 0.46
LCA5LO95447 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.94■□□□□ 0.46
LCA5LO95447 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 AC064862.7-201ENST00000604520 867 ntBASIC17.94■□□□□ 0.46
LCA5LO95447 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.94■□□□□ 0.46
LCA5LO95447 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.94■□□□□ 0.46
LCA5LO95447 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LCA5LO95447 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LCA5LO95447 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.94■□□□□ 0.46
LCA5LO95447 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.94■□□□□ 0.46
LCA5LO95447 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LCA5LO95447 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
LCA5LO95447 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
LCA5LO95447 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.93■□□□□ 0.46
LCA5LO95447 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LCA5LO95447 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LCA5LO95447 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
LCA5LO95447 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.93■□□□□ 0.46
LCA5LO95447 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LCA5LO95447 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 AC104819.1-201ENST00000504587 486 ntBASIC17.93■□□□□ 0.46
LCA5LO95447 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.93■□□□□ 0.46
LCA5LO95447 MPDU1-223ENST00000582151 728 ntBASIC17.93■□□□□ 0.46
LCA5LO95447 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 AP001269.4-201ENST00000609611 512 ntBASIC17.93■□□□□ 0.46
LCA5LO95447 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LCA5LO95447 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LCA5LO95447 REXO1L3P-201ENST00000622202 1288 ntBASIC17.93■□□□□ 0.46
LCA5LO95447 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LCA5LO95447 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.93■□□□□ 0.46
LCA5LO95447 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LCA5LO95447 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 AC006449.6-201ENST00000612330 2296 ntBASIC17.92■□□□□ 0.46
LCA5LO95447 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.92■□□□□ 0.46
LCA5LO95447 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.92■□□□□ 0.46
LCA5LO95447 AL358472.4-201ENST00000633140 710 ntBASIC17.92■□□□□ 0.46
LCA5LO95447 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LCA5LO95447 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.92■□□□□ 0.46
LCA5LO95447 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.92■□□□□ 0.46
LCA5LO95447 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCA5LO95447 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.92■□□□□ 0.46
LCA5LO95447 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LCA5LO95447 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms