Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VAPBO95292 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VAPBO95292 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VAPBO95292 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
VAPBO95292 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17■□□□□ 0.31
VAPBO95292 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17■□□□□ 0.31
VAPBO95292 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VAPBO95292 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17■□□□□ 0.31
VAPBO95292 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 HLA-A-202ENST00000376806 1854 ntBASIC17■□□□□ 0.31
VAPBO95292 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17■□□□□ 0.31
VAPBO95292 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17■□□□□ 0.31
VAPBO95292 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17■□□□□ 0.31
VAPBO95292 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VAPBO95292 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VAPBO95292 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17■□□□□ 0.31
VAPBO95292 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17■□□□□ 0.31
VAPBO95292 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17■□□□□ 0.31
VAPBO95292 AC021087.4-201ENST00000563761 564 ntBASIC17■□□□□ 0.31
VAPBO95292 KRT8P49-201ENST00000604166 1432 ntBASIC17■□□□□ 0.31
VAPBO95292 AC025062.2-201ENST00000605477 670 ntBASIC17■□□□□ 0.31
VAPBO95292 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VAPBO95292 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17■□□□□ 0.31
VAPBO95292 AC004706.3-202ENST00000621574 984 ntBASIC17■□□□□ 0.31
VAPBO95292 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17■□□□□ 0.31
VAPBO95292 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17■□□□□ 0.31
VAPBO95292 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
VAPBO95292 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
VAPBO95292 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
VAPBO95292 DOC2GP-204ENST00000639052 2548 ntBASIC17■□□□□ 0.31
VAPBO95292 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VAPBO95292 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17■□□□□ 0.31
VAPBO95292 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17■□□□□ 0.31
VAPBO95292 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
VAPBO95292 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
VAPBO95292 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VAPBO95292 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.99■□□□□ 0.31
VAPBO95292 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VAPBO95292 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.99■□□□□ 0.31
VAPBO95292 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.99■□□□□ 0.31
VAPBO95292 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.99■□□□□ 0.31
VAPBO95292 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VAPBO95292 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
VAPBO95292 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.99■□□□□ 0.31
VAPBO95292 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.99■□□□□ 0.31
VAPBO95292 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VAPBO95292 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.99■□□□□ 0.31
VAPBO95292 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 CICP6-201ENST00000457191 2729 ntBASIC16.98■□□□□ 0.31
VAPBO95292 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.98■□□□□ 0.31
VAPBO95292 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.98■□□□□ 0.31
VAPBO95292 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.98■□□□□ 0.31
VAPBO95292 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.98■□□□□ 0.31
VAPBO95292 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
VAPBO95292 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.98■□□□□ 0.31
VAPBO95292 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms