Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE3O75131 AC006116.8-202ENST00000587620 1550 ntBASIC16.27■□□□□ 0.2
CPNE3O75131 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CPNE3O75131 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE3O75131 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE3O75131 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CPNE3O75131 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE3O75131 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE3O75131 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE3O75131 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CPNE3O75131 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE3O75131 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE3O75131 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CPNE3O75131 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.27■□□□□ 0.19
CPNE3O75131 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE3O75131 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CPNE3O75131 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE3O75131 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE3O75131 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CPNE3O75131 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE3O75131 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE3O75131 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CPNE3O75131 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE3O75131 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPNE3O75131 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CPNE3O75131 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE3O75131 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CPNE3O75131 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.26■□□□□ 0.19
CPNE3O75131 PAWRP1-201ENST00000451083 565 ntBASIC16.26■□□□□ 0.19
CPNE3O75131 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.26■□□□□ 0.19
CPNE3O75131 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CPNE3O75131 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE3O75131 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.26■□□□□ 0.19
CPNE3O75131 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE3O75131 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE3O75131 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 AC068418.2-201ENST00000577309 3703 ntBASIC16.26■□□□□ 0.19
CPNE3O75131 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 AL596257.1-201ENST00000641463 2694 ntBASIC16.26■□□□□ 0.19
CPNE3O75131 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 AC025580.3-201ENST00000617932 1424 ntBASIC16.26■□□□□ 0.19
CPNE3O75131 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CPNE3O75131 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE3O75131 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CPNE3O75131 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE3O75131 LYSMD4-203ENST00000378904 2122 ntBASIC16.25■□□□□ 0.19
CPNE3O75131 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CPNE3O75131 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE3O75131 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE3O75131 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CPNE3O75131 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE3O75131 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE3O75131 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE3O75131 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE3O75131 AC074386.1-202ENST00000463561 864 ntBASIC16.25■□□□□ 0.19
CPNE3O75131 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE3O75131 SNHG9-202ENST00000564014 471 ntBASIC16.25■□□□□ 0.19
CPNE3O75131 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE3O75131 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE3O75131 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE3O75131 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
CPNE3O75131 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE3O75131 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE3O75131 ELL2P1-201ENST00000413990 1906 ntBASIC16.25■□□□□ 0.19
CPNE3O75131 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms