Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SLC28A2O43868 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.33■□□□□ 0.2
SLC28A2O43868 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC28A2O43868 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC28A2O43868 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC28A2O43868 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SLC28A2O43868 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC28A2O43868 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC28A2O43868 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC28A2O43868 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.32■□□□□ 0.2
SLC28A2O43868 IGHV3-52-201ENST00000519770 353 ntBASIC16.32■□□□□ 0.2
SLC28A2O43868 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SLC28A2O43868 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC28A2O43868 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC28A2O43868 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.32■□□□□ 0.2
SLC28A2O43868 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 AC092865.6-201ENST00000642101 219 ntBASIC16.32■□□□□ 0.2
SLC28A2O43868 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC28A2O43868 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC28A2O43868 NKILA-202ENST00000614771 2598 ntBASIC16.32■□□□□ 0.2
SLC28A2O43868 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC28A2O43868 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC28A2O43868 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SLC28A2O43868 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC28A2O43868 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC28A2O43868 AC007967.3-201ENST00000434308 558 ntBASIC16.31■□□□□ 0.2
SLC28A2O43868 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC28A2O43868 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.31■□□□□ 0.2
SLC28A2O43868 AL138831.2-201ENST00000606564 490 ntBASIC16.31■□□□□ 0.2
SLC28A2O43868 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.31■□□□□ 0.2
SLC28A2O43868 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC28A2O43868 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC28A2O43868 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC28A2O43868 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC28A2O43868 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC28A2O43868 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC28A2O43868 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC28A2O43868 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC28A2O43868 AC011676.5-201ENST00000624864 2660 ntBASIC16.3■□□□□ 0.2
SLC28A2O43868 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC28A2O43868 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC28A2O43868 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 MYCLP1-201ENST00000372451 1075 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms