Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.88■□□□□ 0.29
LDB2O43679 AC009947.1-201ENST00000444350 727 ntBASIC16.88■□□□□ 0.29
LDB2O43679 AC108751.1-201ENST00000490852 363 ntBASIC16.88■□□□□ 0.29
LDB2O43679 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB2O43679 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.88■□□□□ 0.29
LDB2O43679 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB2O43679 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.88■□□□□ 0.29
LDB2O43679 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LDB2O43679 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LDB2O43679 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 AC006538.1-201ENST00000567905 1585 ntBASIC16.88■□□□□ 0.29
LDB2O43679 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LDB2O43679 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB2O43679 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB2O43679 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LDB2O43679 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LDB2O43679 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 AL353732.1-201ENST00000569618 1459 ntBASIC16.87■□□□□ 0.29
LDB2O43679 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LDB2O43679 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
LDB2O43679 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB2O43679 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.87■□□□□ 0.29
LDB2O43679 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.87■□□□□ 0.29
LDB2O43679 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.87■□□□□ 0.29
LDB2O43679 PRSS29P-201ENST00000440800 595 ntBASIC16.87■□□□□ 0.29
LDB2O43679 HLA-J-202ENST00000469281 1241 ntBASIC16.87■□□□□ 0.29
LDB2O43679 RNA5SP415-201ENST00000517246 115 ntBASIC16.87■□□□□ 0.29
LDB2O43679 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.87■□□□□ 0.29
LDB2O43679 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.87■□□□□ 0.29
LDB2O43679 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.87■□□□□ 0.29
LDB2O43679 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.87■□□□□ 0.29
LDB2O43679 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB2O43679 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.87■□□□□ 0.29
LDB2O43679 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.87■□□□□ 0.29
LDB2O43679 AC010654.1-201ENST00000615722 808 ntBASIC16.87■□□□□ 0.29
LDB2O43679 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
LDB2O43679 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LDB2O43679 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB2O43679 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.87■□□□□ 0.29
LDB2O43679 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB2O43679 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.87■□□□□ 0.29
LDB2O43679 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LDB2O43679 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LDB2O43679 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LDB2O43679 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 AL671710.1-201ENST00000610245 2349 ntBASIC16.86■□□□□ 0.29
LDB2O43679 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LDB2O43679 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.86■□□□□ 0.29
LDB2O43679 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
LDB2O43679 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LDB2O43679 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.86■□□□□ 0.29
LDB2O43679 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.86■□□□□ 0.29
LDB2O43679 AP000347.1-202ENST00000435868 847 ntBASIC16.86■□□□□ 0.29
LDB2O43679 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 AC005412.3-201ENST00000580309 715 ntBASIC16.86■□□□□ 0.29
LDB2O43679 ACTL9-202ENST00000612068 1252 ntBASIC16.86■□□□□ 0.29
LDB2O43679 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.86■□□□□ 0.29
LDB2O43679 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
LDB2O43679 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.86■□□□□ 0.29
LDB2O43679 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.86■□□□□ 0.29
LDB2O43679 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.86■□□□□ 0.29
LDB2O43679 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LDB2O43679 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB2O43679 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms