Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CHKB-CPT1BH3BT56 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
CHKB-CPT1BH3BT56 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 KRT18P55-202ENST00000578578 1546 ntBASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 SLC9A3P3-201ENST00000457608 2229 ntBASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 PTMA-205ENST00000410064 814 ntTSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 ABHD17AP5-201ENST00000580133 923 ntBASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 KRT8P45-201ENST00000414328 1447 ntBASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 TFP1-202ENST00000475455 1573 ntBASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
CHKB-CPT1BH3BT56 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 MYLKP1-201ENST00000509077 1580 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms