Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC006116.8-202ENST00000587620 1550 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 LINC00982-205ENST00000420957 435 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AL645939.2-201ENST00000427340 991 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 ALG1L5P-201ENST00000482043 771 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AP002472.1-201ENST00000577490 586 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC023141.13-201ENST00000604991 943 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC004877.2-201ENST00000623941 599 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AL121761.2-201ENST00000598007 1648 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AC092850.2-201ENST00000623821 2697 ntBASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TMX2-CTNND1H3BSU7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.64■□□□□ 0.26
TMX2-CTNND1H3BSU7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
TMX2-CTNND1H3BSU7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.64■□□□□ 0.26
TMX2-CTNND1H3BSU7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 RHOQP3-201ENST00000437982 621 ntBASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 AC074386.1-202ENST00000463561 864 ntBASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 AC106886.4-201ENST00000623557 2502 ntBASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 BCAR1-209ENST00000546196 1340 ntBASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.64■□□□□ 0.25
TMX2-CTNND1H3BSU7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.63■□□□□ 0.25
TMX2-CTNND1H3BSU7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms