Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FAM86GP-201ENST00000448322 971 ntBASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 AC109635.5-201ENST00000533593 962 ntBASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 MPDU1-223ENST00000582151 728 ntBASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 AL031055.1-201ENST00000606362 631 ntBASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 CROCCP2-202ENST00000412962 2773 ntBASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 UXT-AS1-201ENST00000590504 1525 ntBASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 KRT8P49-201ENST00000604166 1432 ntBASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 PCDHB18P-201ENST00000524813 2368 ntBASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 RNU1-129P-201ENST00000384064 167 ntBASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 PMS2P4-201ENST00000412466 1052 ntBASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 AC069335.1-201ENST00000489972 472 ntBASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 U1.21-201ENST00000580816 167 ntBASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 AC011467.4-201ENST00000594891 528 ntBASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 WASH6P-202ENST00000359512 1437 ntBASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TBC1D3FA6NER0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 SPCS2P4-201ENST00000436160 681 ntBASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 LINC02084-201ENST00000606069 1096 ntBASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 AC005332.8-201ENST00000622750 2735 ntBASIC16.77■□□□□ 0.28
TBC1D3FA6NER0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TBC1D3FA6NER0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TBC1D3FA6NER0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TBC1D3FA6NER0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TBC1D3FA6NER0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TBC1D3FA6NER0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TBC1D3FA6NER0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TBC1D3FA6NER0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms