Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT2A6NDA9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT2A6NDA9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.05■□□□□ 0.16
LRIT2A6NDA9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 IGLL3P-201ENST00000412472 434 ntBASIC16.05■□□□□ 0.16
LRIT2A6NDA9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 SLC25A1P1-201ENST00000528351 927 ntBASIC16.05■□□□□ 0.16
LRIT2A6NDA9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 AL139011.1-202ENST00000642063 584 ntBASIC16.05■□□□□ 0.16
LRIT2A6NDA9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT2A6NDA9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 ZNF259P1-201ENST00000407656 1365 ntBASIC16.04■□□□□ 0.16
LRIT2A6NDA9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.04■□□□□ 0.16
LRIT2A6NDA9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 HCG4-201ENST00000418983 998 ntBASIC16.03■□□□□ 0.16
LRIT2A6NDA9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 AC087641.1-201ENST00000557561 1021 ntBASIC16.03■□□□□ 0.16
LRIT2A6NDA9 AC096734.2-201ENST00000562054 433 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms