Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 AC126177.1-201ENST00000547829 2218 ntBASIC18.39■□□□□ 0.53
CCDC66A2RUB6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC66A2RUB6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 KRT18P38-201ENST00000449496 1282 ntBASIC18.38■□□□□ 0.53
CCDC66A2RUB6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 AC060834.1-201ENST00000443027 2032 ntBASIC18.38■□□□□ 0.53
CCDC66A2RUB6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 AC010460.3-201ENST00000511359 1579 ntBASIC18.38■□□□□ 0.53
CCDC66A2RUB6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC66A2RUB6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 AC112907.2-201ENST00000448639 330 ntBASIC18.37■□□□□ 0.53
CCDC66A2RUB6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC66A2RUB6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC66A2RUB6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms