Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL356488.2-201ENST00000602755 427 ntBASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC073592.4-201ENST00000623827 446 ntBASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AL353593.2-201ENST00000602529 1483 ntBASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AL591424.1-201ENST00000442569 1213 ntBASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AL589182.2-201ENST00000619332 1049 ntBASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FLJ38576-201ENST00000623820 2459 ntBASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PCDHB19P-201ENST00000570871 2371 ntBASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AL049757.1-201ENST00000616842 1596 ntBASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC25A1P3-201ENST00000395415 828 ntBASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 BX842568.4-201ENST00000421222 227 ntBASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 STK19B-204ENST00000512515 211 ntBASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 UNC93B6-202ENST00000528242 690 ntBASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms