Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 HLA-J-202ENST00000469281 1241 ntBASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 OR7E14P-202ENST00000530490 1290 ntBASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 AC060766.1-201ENST00000590824 627 ntBASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 AC013467.2-201ENST00000605472 835 ntBASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 AL139011.1-202ENST00000642063 584 ntBASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS9D1Q9Y2B5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 PTCHD3P3-201ENST00000403073 906 ntBASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 MIR1199-201ENST00000621445 119 ntBASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 PGM5P2-202ENST00000637225 1043 ntBASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS9D1Q9Y2B5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
VPS9D1Q9Y2B5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.83■□□□□ 0.29
VPS9D1Q9Y2B5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VPS9D1Q9Y2B5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.83■□□□□ 0.29
VPS9D1Q9Y2B5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VPS9D1Q9Y2B5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VPS9D1Q9Y2B5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
VPS9D1Q9Y2B5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 AF186996.4-201ENST00000467186 377 ntBASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 AC136632.2-201ENST00000512891 861 ntBASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS9D1Q9Y2B5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms