Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 AC109322.1-201ENST00000524499 1264 ntBASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 AC087641.1-201ENST00000557561 1021 ntBASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 AC009093.7-201ENST00000623853 1223 ntBASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1Q9Y2A7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 GNAS-203ENST00000306120 1878 ntBASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 KRT18P32-201ENST00000424695 1287 ntBASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 AC067863.1-201ENST00000494933 530 ntBASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 AC109635.5-201ENST00000533593 962 ntBASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 AC092364.2-202ENST00000597012 1073 ntBASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1Q9Y2A7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 AC092474.2-201ENST00000424288 719 ntBASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 AC243562.1-201ENST00000560672 389 ntBASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 AC093512.1-201ENST00000617969 520 ntBASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NCKAP1Q9Y2A7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms