Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AL845331.1-201ENST00000424978 1190 ntBASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 AC103564.2-201ENST00000432853 1299 ntBASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 TOB2P1-201ENST00000469761 992 ntBASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 IGHV3-52-201ENST00000519770 353 ntBASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 AC093458.2-201ENST00000623150 629 ntBASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 RNF216P1-203ENST00000404404 2427 ntBASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 LINC02228-204ENST00000642115 2962 ntBASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 AC092384.3-202ENST00000564646 2873 ntBASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HHLA3Q9XRX5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AP002383.4-201ENST00000442518 975 ntBASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 KRT17P6-201ENST00000453795 1220 ntBASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AC104819.1-201ENST00000504587 486 ntBASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AP000867.3-201ENST00000524675 377 ntBASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 TPSP2-201ENST00000561760 610 ntBASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AC005336.2-201ENST00000593183 939 ntBASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AC016396.2-201ENST00000562575 1417 ntBASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HHLA3Q9XRX5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 AL365203.3-201ENST00000609742 2057 ntBASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms